Membrane Floatation
Experiments: (beth 1/02)
homogenize two rat brains or other cells, tissue etc. in buffer - I used PHEM, but should try Schnapp buffer.
Low speed spin at 12 k for 30 min.
High speed spind of sup - 36 k for 1 hour.
Resuspend pellet in 300 ul of buffer with DTT and protease inhibitors. Probably need to use small homogenizer.
Divide membrane into different fractions - ie. membranes + buffer, membrane + slat, etc.
incubate at room temp for 15-20 min.
Mix each 200 ul sample with 800 ul of 2.5 M sucrose. Place in the bottom of a 12 ml swinging bucket centrifuge tube.
Layer onto this sample 6 ml of 1.5 M sucrose, and then 5 ml of 0.6 M sucrose.
Centrifure at 40 K for 2 hours at 4 C. (Maybe try 3-4 hr with spectrin to clarify 1.5 M layer - i saw a lot of trailing in this
fraction which I didn't see with dynein)
Collect fractions from 0.6/1.5 M interphase, and from the 1.5M and 2 M fractions.
That's the basic prep. I tried extractions with KI and neomycin like Schnapp did, but nothing was extracted in PHEM. That's why I suggest
the Schnapp 1/2X buffer.